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To see my NIH biosketch, please click on the pdf above.

Basics

Name Anthony Taolun Wu
Label Medical Scientist Training Program (MSTP|MD/PhD) student
Email wuat2@hs.uci.edu
Url https://atwu.github.io
Summary MSTP student in his second year of PhD in Computer Science

Work

  • 12/2018 - 08/2022
    Research Technician II
    Mallinckrodt Institute of Radiology
    I built Deep Neural Nets to classify pathology using a type of diffusion MRI called Diffusion Basis Spectrum Imaging under the supervision of Prof Sheng-kwei Song
    • Diffusion Basis Spectrum Imaging
    • MRI
    • Machine Learning
    • Multiple Sclerosis
    • glioblastoma
    • prostate cancer
  • 10/2018 - 05/2021
    Teachers Assistant
    Washington University in St. Louis|McKelvey School of Engineering
    TAed for multiple courses including Engineering Ethics and Sustainability, Data Structures, Introduction to Artificial Intelligence, Quantitative Physiology, Introduction to Biomedical Engineering. Lectured Engineering Ethics and Sustainability.
    • Engineering ethics
    • Artificial intelligence
    • Data Structures
    • Quantitative Physiology
    • Small group discussion
    • Lecturing
  • 08/2024 - PRES
    Medical Student Assistant Teacher
    University of California, Irvine School of Medicine
    I run teaching sessions for first year medical students
    • Teaching
    • Medical School
    • Physiology
    • Histology
    • Biostatistics
  • 08/2023 - PRES
    Graduate Researcher, Teaching Assistant
    University of California, Irvine Department of Computer Science
    I perform research in medical image analysis and currently am TAing CS 284A: AI in Biology and Medicine
    • Medical Image Analysis
    • Teaching
  • 01/2021 - 10/2021
    Patient Care Technician
    Barnes-Jewish Hospital|Cardiothoracic Stepdown Unit
    Performed phlebotomies, EKGs, foley care, chlorohexidine treatments, CPR, LVAD and chest tube care and transport of patients. Obtained vital signs (including manual and doppler blood pressures), blood glucose, and cardiac telemetry data from patients.
    • Patient care

Grants

Volunteer

  • PLACEHOLDER - PLACEHOLDER
    PLACEHOLDER
    PLACEHOLDER
    PLACEHOLDER
    • PLACEHOLDER
    • PLACEHOLDER
  • 09/2023 - pres
    Peer Reviewer for Journal of Digital Imaging
    Society for Imaging Informatics in Medicine
    I review articles related to machine learning and artificial intelligence as applied to medical imaging
    • reviewer
    • imaging

Education

  • 2023 - 2027

    Irvine, CA

    PhD
    University of California, Irvine
    Computer Science
  • 2022 - 2030

    Irvine, CA

    MD
    University of California, Irvine School of Medicine
    Medicine
  • 2017 - 2021

    St. Louis, MO

    BS, BS
    Washington University in St. Louis
    Major in Biomedical Engineering, Major in Computer Science

Awards

Publications

  • 5/2020
    Deep learning with diffusion basis spectrum imaging for classification of multiple sclerosis lesions
    Annals of Clinical and Translational Neurology
    Multiple sclerosis (MS) lesions are heterogeneous with regard to inflammation, demyelination, axonal injury, and neuronal loss. We previously developed a diffusion basis spectrum imaging (DBSI) technique to better address MS lesion heterogeneity. We hypothesized that the profiles of multiple DBSI metrics can identify lesion-defining patterns. Here we test this hypothesis by combining a deep learning algorithm using deep neural network (DNN) with DBSI and other imaging methods.
  • 10/2020
    Diffusion Histology Imaging Combining Diffusion Basis Spectrum Imaging (DBSI) and Machine Learning Improves Detection and Classification of Glioblastoma Pathology
    Clinical Cancer Research
    Glioblastoma (GBM) is one of the deadliest cancers with no cure. While conventional MRI has been widely adopted to examine GBM clinically, accurate neuroimaging assessment of tumor histopathology for improved diagnosis, surgical planning, and treatment evaluation remains an unmet need in the clinical management of GBMs. We employ a novel diffusion histology imaging (DHI) approach, combining diffusion basis spectrum imaging (DBSI) and machine learning, to detect, differentiate, and quantify areas of high cellularity, tumor necrosis, and tumor infiltration in GBM
  • 02/2021
    Diffusion histology imaging differentiates distinct pediatric brain tumor histology
    Scientific Reports
    High-grade pediatric brain tumors have the highest mortality rates among children. Conventional MRI is commonly used for clinical examination, but accurately detecting and distinguishing tumor types remains a challenge. We introduced a novel approach called Diffusion Histology Imaging (DHI) using diffusion basis spectrum imaging (DBSI) metrics to train a deep neural network. DHI aims to identify and quantify different tumor components such as normal white matter, dense and less dense tumor regions, infiltrating edges, necrosis, and hemorrhage. By combining DBSI metrics and deep learning, we achieved an 85.8% accuracy in classifying pediatric tumor histology.

Languages

English
Native speaker
Chinese
Native speaker

Interests

AI/ML in Medicine
Computer Vision
Generative Models
Machine Learning
Artificial Intelligence
Imaging
Radiology
Diagnostics
Real-time feedback
Technology in Medicine Interest Group at UCI-SOM
President: 2023-present
External Affairs Chair: 2022-2023
Radiology Interest Group at UCI-SOM
Research Chair: 2023-present
UCI Taekwondo Collegiate Club Sports
Medical Officer
Poomsae Team